Looking at the Canadian Kubota parts site, it appears there are two different port reliefs installed in the various outlets: "Port relief high" and "Port relief low". I assume high and low are relative to pressure.
From there it gets confusing as hell. There are 3 different relevant diagrams. Control Valve shows 6 different valve bodies, labelled A through E. Note the absence of an F. This is because there are two labelled C (apparently these are the outriggers and don't have port reliefs).
The Control Valve diagram labels all the ports A through G across the top and H through N across the bottom. But the Hydraulic Hose (Boom/Dipper) diagram relabels the ports such that B is now A, I is now B, E is now C and L is now D.
Near as I can tell, Dipper is the second third set of ports from the right (second valve body from the right, first two ports are Pump and Tank), boom is second set of ports from the left.
The Dipper valve body has one of each relief valve, with low on the top, high on the bottom. The Boom valve body has a high on both top and bottom.
If I've traced all that mess out correctly (which is by no means certain), mixing and matching would result in poor downward digging boom force due to lower available pressure.
The other thought that comes to mind is the Boom function should have a float position, IIRC. If the boom still has a float position in the current configuration that suggests the PO swapped the entire valve bodies, not just hoses and/or relief valves. That should be a simple check: which stick has the float detent now?